Interactive and Dynamic Graphics for Data Analysis With R and Ggobi

This richly illustrated book describes the use of interactive and dynamic graphics as part of multidimensional data analysis. Chapters include clustering, supervised classification, and working with missing values. A variety of plots and interaction metho

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Kurt Hornik Giovanni Parmigiani

Use R! Albert:Bayesian Computation with R Cook/Swayne:Interactive and Dynamic Graphics for Data Analysis Paradis: Analysis of Phylogenetics and Evolution with R Pfaff:Analysis of Integrated and Cointegrated Time Series with R

Dianne Cook Deborah F. Swayne

Interactive and Dynamic Graphics for Data Analysis With R and GGobi

With Contributions by Andreas Buja, Duncan Temple Lang, Heike Hofmann, Hadley Wickham, and Michael Lawrence

Dianne Cook Department of Statistics Iowa State University 325 Snedecor Hall Ames, IA 50011-1210 [email protected]

Deborah F. Swayne AT & T Labs - Research Shannon Laboratory 180 Park Avenue Florham Park, NJ 07932-1049 [email protected]

Series Editors: Robert Gentleman Program in Computational Biology Division of Public Health Sciences Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N, M2-B876 Seattle, Washington 981029-1024 USA

Kurt Hornik Department für Statistik und Mathematik Wirtschaftsuniversität Wien Augasse 2-6 A-1090 Wien Austria

Giovanni Parmigiani The Sidney Kimmel Comprehensive Cancer Center at Johns Hopkins University 550 North Broadway Baltimore, MD 21205-2011 USA ISBN 978-0-387-71761-6

e-ISBN 978-0-387-71762-3

Library of Congress Control Number: 2007925720 © 2007 Springer Science+Business Media, LLC All rights reserved. This work may not be translated or copied in whole or in part without the written permission of the publisher (Springer Science+Business Media, LLC, 233 Spring Street, New York, NY 10013, USA), except for brief excerpts in connection with reviews or scholarly analysis. Use in connection with any form of information storage and retrieval, electronic adaptation, computer software, or by similar or dissimilar methodology now known or hereafter developed is forbidden. The use in this publication of trade names, trademarks, service marks, and similar terms, even if they are not identified as such, is not to be taken as an expression of opinion as to whether or not they are subject to proprietary rights. Cover illustration: Brushing a cluster that was found by using the grand tour to explore two-dimensional projections of five-dimensional data on Australian crabs. HTML HyperText Markup Language; claimed as a trademark or generic term by MIT, ERCIM, and/or Keio on behalf of the W3C. Data Desk is a registered trademark of Data Description, Inc. Spotfire is a registered trademark of Spotfire, Inc. JMP is a registered trademark of SAS Institute Inc. Linux is a registered trademark of Linus Torvalds, the original author of the Linux kernel. Mac OS X - Operating System software - is a registered trademark of Apple Computer, Inc. S-PLUS is a registered trademark R is a registered trademark of Microsoft Corporation. Windows is a of Insightful Corporation. Microsoft registered trademarks of Microsoft Corporation. XML - Extensible Markup Language; Language by W3C - claimed as a trademark or generic term by MIT, ERCIM, and/or Keio on behalf of the W3C. Facebook is a registered trademark of Facebook Inc. MySpace is a R