A New Kind of Computational Biology Cellular Automata Based Mode
This book reflects more than three decades of research on Cellular Automata (CA), and nearly a decade of work on the application of CA to model biological strings, which forms the foundation of 'A New Kind of Computational Biology' pioneered by the start-
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nd of Computational Biology Cellular Automata Based Models for Genomics and Proteomics
A New Kind of Computational Biology
Parimal Pal Chaudhuri Soumyabrata Ghosh Adip Dutta Somshubhro Pal Choudhury •
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A New Kind of Computational Biology Cellular Automata Based Models for Genomics and Proteomics
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Parimal Pal Chaudhuri CARLBio Pvt. Ltd. Kolkata, West Bengal, India
Adip Dutta CARLBio Pvt. Ltd. Kolkata, West Bengal, India
Soumyabrata Ghosh CARLBio Pvt. Ltd. Kolkata, West Bengal, India
Somshubhro Pal Choudhury CARLBio Pvt. Ltd. Kolkata, West Bengal, India
ISBN 978-981-13-1638-8 ISBN 978-981-13-1639-5 https://doi.org/10.1007/978-981-13-1639-5
(eBook)
Library of Congress Control Number: 2018948602 © Springer Nature Singapore Pte Ltd. 2018 This work is subject to copyright. All rights are reserved by the Publisher, whether the whole or part of the material is concerned, specifically the rights of translation, reprinting, reuse of illustrations, recitation, broadcasting, reproduction on microfilms or in any other physical way, and transmission or information storage and retrieval, electronic adaptation, computer software, or by similar or dissimilar methodology now known or hereafter developed. The use of general descriptive names, registered names, trademarks, service marks, etc. in this publication does not imply, even in the absence of a specific statement, that such names are exempt from the relevant protective laws and regulations and therefore free for general use. The publisher, the authors and the editors are safe to assume that the advice and information in this book are believed to be true and accurate at the date of publication. Neither the publisher nor the authors or the editors give a warranty, express or implied, with respect to the material contained herein or for any errors or omissions that may have been made. The publisher remains neutral with regard to jurisdictional claims in published maps and institutional affiliations. This Springer imprint is published by the registered company Springer Nature Singapore Pte Ltd. The registered company address is: 152 Beach Road, #21-01/04 Gateway East, Singapore 189721, Singapore
Prologue
Throughout my professional career, since the early 1960s, I had been associated with computers and computer science. However, by the end of the last century, I had the realization that I will be able to derive higher level of academic satisfaction from the study of life sciences. I also developed the conviction that Mother Nature has provided us with a voluminous encyclopedia from which we can learn new things every day. The knowledge gathered from the study of nature can be utilized for solving the problems in different fields of science and technology. Let me illustrate the point with a few examples. If we study the invention process of airplane by the Wright brothers, we can notice that during the period of 1899–1902, they spent considerable time to study birds in flight. From this study, they formulated the basic technology of airplane design. The next example c
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