Biodegradation and Bioremediation
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Active uptake 47 Agrobacterium radiobacter 160 Alkane-degrading sulfate reducers 71-72 Anaerobic biodegradation 57 alkane 71 benzene 61 methylnaphthalene 70 naphthalene 69 PAHs 68 Anaerobic organisms 58 Anaerobic reduction route 8 Anaerobic-aerobic treatment 140, 143 Aquifer 140 Arthrobacter protophormiae RKJ100 155, 158 Atrazine 162 Azoarcus tolulyticus Tol4 60
Biomarkers 296 Bioremediation of Nitroaromatic compounds 149-151 PAHs 1 PAHs polluted soil 2 PCBs 1 TCE 1 xenobiotic compounds 2, 12 Bioremediation process assessment 279 monitoring 279 Biosurfactants 44, 46 Biphenyl dioxygenase 129, 180-181, 183,187-188,244 Brown-rot fungi 266-271 BTEX 58-59 Burkholderia cepacia PB4 156
Bacterial biosensors 293 community 30 Benzene dioxygenase 182-183 Benzo[a]pyrene 91 Benzoate dioxygenase 181 Benzylsuccinate synthase 61 Bioadsorbents 236-237 Bioaugmentation 106 Bioavailability 34, 42 PAHs 89,91 Biocatalytic strategy 12 system 13 Bioctalysts designing for bioremediation 12 Biodegradation estimation methods 280 potential 2, 13 systems 4, 9 Biogeochemical cycle 3 BIOLOG 289
Capacity for hydrocarbon removal 31 Carbazole dioxygenase 183 Carbon metabolism 198,203-204 Carbon source supplementation 107 utilization proftle 22 Carboxylation 63 Carcinogenic PAHs 86, 92 potency 86 Catabolic enzymes 10 genes 3 Cell-surface expression 237-238 Cellulomonas fimi 241 Cellulose-binding domain 241 Chemotaxis 43, 48 Chimeric enzymes 244 Chlorine pre-treatment 255 Chlorobenzoate dioxygenase 183 reductive dehalogenases 217 Ciprofloaxcnic 269-271
306 Clostridium thermoaceticum 157 Comamonas acidovorans NBA-10 156 Combined remediation technologies 256-261 Co-metabolic processes 203 Cometabolism 9, 127 Community assessment 23 dynamics 26 response to hydrocarbon exposure 26 Community-level physiology profiling 28 Complexity of PAH transformation 92 Composting 139 Contaminant bioavailability 3 Conventional plating 283 Conversion of alkanes dioxygenase-mediated 6-8 monooxygenase-mediated 6-7 Co-oxidation 127, 130, 142 Creosote-contaminated soil 91 Cytochrome P-450 244
Dealkylation 8, 185 Dechloromonas sp. 62 Dehalobacter restrictus 224 Dehalococcoides ethenogenes 195, 225-226 Dehalogenation mechanism 206-207 Dehalorespiration 134 Dehalospirillum multivorans 223, 225-226 Dehydrogenase activity 288 Dehydrogenation 64 Deinococcus radiodurans 41,240,242 Denaturing gradient gel electrophoresis 24 Denitration 8 Dense non-aqueous phase liquid (DNAPL) 87 Desaturation 185, 186 Designer biocatalysts 236 Desulfitobacterium chlororespirans 221 Desulfitobacterium dehalogenans 218-220,226 Desulfitobacterium frappieri TCEl 222-223 Desulfitobacterium hafniense 219-220 Desulfitobacterium PCE1 220,222-223 Desulfitobacterium PCE-S 222 Desulfitobacterium sp. strain Y51 223, 225-226
Subject Index Desulfobacterium cetonicum 66 Desulfobacula tolulica 61 Desulfococcus multivorans 66 Desulfomonile tiedjei 215-217 DGGE 291 Dichloromethane reductive dehalogenases 213 Dihydrodiol 177, 184 Dinitrotoluene dioxygenase 183 Dioxygenation of nitroaromatic ring 152 Diversity o
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