DNA Computing 11th International Workshop on DNA Computing, DNA11, L

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Editorial Board David Hutchison Lancaster University, UK Takeo Kanade Carnegie Mellon University, Pittsburgh, PA, USA Josef Kittler University of Surrey, Guildford, UK Jon M. Kleinberg Cornell University, Ithaca, NY, USA Friedemann Mattern ETH Zurich, Switzerland John C. Mitchell Stanford University, CA, USA Moni Naor Weizmann Institute of Science, Rehovot, Israel Oscar Nierstrasz University of Bern, Switzerland C. Pandu Rangan Indian Institute of Technology, Madras, India Bernhard Steffen University of Dortmund, Germany Madhu Sudan Massachusetts Institute of Technology, MA, USA Demetri Terzopoulos University of California, Los Angeles, CA, USA Doug Tygar University of California, Berkeley, CA, USA Moshe Y. Vardi Rice University, Houston, TX, USA Gerhard Weikum Max-Planck Institute of Computer Science, Saarbruecken, Germany

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Alessandra Carbone Niles A. Pierce (Eds.)

DNA Computing 11th International Workshop on DNA Computing, DNA11 London, ON, Canada, June 6-9, 2005 Revised Selected Papers

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Volume Editors Alessandra Carbone Université Pierre et Marie Curie Department of Computer Science INSERM U511, 91 Boulevard de L’Hôpital, 75013 Paris, France E-mail: [email protected] Niles A. Pierce California Institute of Technology Applied and Computational Mathematics, Bioengineering MC 114-96, Pasadena, CA 91125, USA E-mail: [email protected]

Library of Congress Control Number: 2006925104 CR Subject Classification (1998): F.1, F.2.2, I.2.9, J.3 LNCS Sublibrary: SL 1 – Theoretical Computer Science and General Issues ISSN ISBN-10 ISBN-13

0302-9743 3-540-34161-7 Springer Berlin Heidelberg New York 978-3-540-34161-1 Springer Berlin Heidelberg New York

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Preface

Biomolecular computing has emerged as an interdisciplinary field that draws on chemistry, computer science, mathematics, molecular biology, and physics. The International Meeting on DNA Computing (formerly DNA Based Computers) is a forum where scientists with different backgrounds, yet sharing common interests in biomolecular computing and DNA nanotechnology, meet and present their latest results. Continuing this tradition, the 11th International Meeting on DNA Computing was held June 6–9, 2005