Advances in New Technology for Targeted Modification of Plant Genomes

This work provides an overview of the latest advances on precise genomic engineering technologies in plants. The research provided covers a wide range of topics, including recombinase and engineered nucleases-mediated targeted modification, negative/

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ances in New Technology for Targeted Modification of Plant Genomes

Advances in New Technology for Targeted Modification of Plant Genomes

Feng Zhang • Holger Puchta • James G. Thomson Editors

Advances in New Technology for Targeted Modification of Plant Genomes

Editors Feng Zhang Cellectis Plant Sciences New Brighton, MN, USA

Holger Puchta Botanical Institute Karlsruhe Institute of Technology Karlsruhe, Germany

James G. Thomson Crop Improvement and Genetics Unit USDA Agricultural Research Service Western Regional Research Center Albany, CA, USA

ISBN 978-1-4939-2555-1 ISBN 978-1-4939-2556-8 DOI 10.1007/978-1-4939-2556-8

(eBook)

Library of Congress Control Number: 2015936732 Springer New York Heidelberg Dordrecht London © Springer Science+Business Media New York 2015 This work is subject to copyright. All rights are reserved by the Publisher, whether the whole or part of the material is concerned, specifically the rights of translation, reprinting, reuse of illustrations, recitation, broadcasting, reproduction on microfilms or in any other physical way, and transmission or information storage and retrieval, electronic adaptation, computer software, or by similar or dissimilar methodology now known or hereafter developed. The use of general descriptive names, registered names, trademarks, service marks, etc. in this publication does not imply, even in the absence of a specific statement, that such names are exempt from the relevant protective laws and regulations and therefore free for general use. The publisher, the authors and the editors are safe to assume that the advice and information in this book are believed to be true and accurate at the date of publication. Neither the publisher nor the authors or the editors give a warranty, express or implied, with respect to the material contained herein or for any errors or omissions that may have been made. Printed on acid-free paper Springer Science+Business Media LLC New York is part of Springer Science+Business Media (www.springer.com)

Contents

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Double-Strand Break Repair and Its Application to Genome Engineering in Plants ............................................................ Holger Puchta and Friedrich Fauser

1

Engineering Meganuclease for Precise Plant Genome Modification ............................................................................... Fayza Daboussi, Thomas J. Stoddard, and Feng Zhang

21

High Efficient Genome Modification by Designed Zinc Finger Nuclease ......................................................................................... Yiping Qi

39

Engineered TAL Effector Proteins: Versatile Reagents for Manipulating Plant Genomes ............................................................ Michelle Christian and Daniel F. Voytas

55

5

Oligo-Mediated Targeted Gene Editing .................................................. Greg F.W. Gocal, Christian Schöpke, and Peter R. Beetham

73

6

Gene Targeting in Crop Species with Effective Selection Systems ....... Takaki Yamauchi and Shigeru Iida

91

7

Recombin