Integrative Structural Biology with Hybrid Methods

This book presents a new emerging concept of "Integrative Structural Biology". It covers current trends of the molecular and cellular structural biology, providing new methods to observe, validate, and keep the structural models o

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Haruki Nakamura · Gerard Kleywegt  Stephen K. Burley · John L. Markley Editors

Integrative Structural Biology with Hybrid Methods

Advances in Experimental Medicine and Biology Volume 1105

Editorial Board IRUN R. COHEN, The Weizmann Institute of Science, Rehovot, Israel ABEL LAJTHA, N.S. Kline Institute for Psychiatric Research, Orangeburg, NY, USA JOHN D. LAMBRIS, University of Pennsylvania, Philadelphia, PA, USA RODOLFO PAOLETTI, University of Milan, Milan, Italy NIMA REZAEI, Children’s Medical Center Hospital, Tehran University of Medical Sciences, Tehran, Iran

More information about this series at http://www.springer.com/series/5584

Haruki Nakamura • Gerard Kleywegt Stephen K. Burley • John L. Markley Editors

Integrative Structural Biology with Hybrid Methods

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Editors Haruki Nakamura Institute for Protein Research Osaka University Suita, Osaka, Japan Stephen K. Burley Rutgers, The State University of New Jersey Piscataway, NJ, USA

Gerard Kleywegt European Bioinformatics Institute Cambridgeshire, UK John L. Markley Biochemistry Department University of Wisconsin-Madison Madison, WI, USA

ISSN 0065-2598 ISSN 2214-8019 (electronic) Advances in Experimental Medicine and Biology ISBN 978-981-13-2199-3 ISBN 978-981-13-2200-6 (eBook) https://doi.org/10.1007/978-981-13-2200-6 Library of Congress Control Number: 2018962157 © Springer Nature Singapore Pte Ltd. 2018 This work is subject to copyright. All rights are reserved by the Publisher, whether the whole or part of the material is concerned, specifically the rights of translation, reprinting, reuse of illustrations, recitation, broadcasting, reproduction on microfilms or in any other physical way, and transmission or information storage and retrieval, electronic adaptation, computer software, or by similar or dissimilar methodology now known or hereafter developed. The use of general descriptive names, registered names, trademarks, service marks, etc. in this publication does not imply, even in the absence of a specific statement, that such names are exempt from the relevant protective laws and regulations and therefore free for general use. The publisher, the authors and the editors are safe to assume that the advice and information in this book are believed to be true and accurate at the date of publication. Neither the publisher nor the authors or the editors give a warranty, express or implied, with respect to the material contained herein or for any errors or omissions that may have been made. The publisher remains neutral with regard to jurisdictional claims in published maps and institutional affiliations. This Springer imprint is published by the registered company Springer Nature Singapore Pte Ltd. The registered company address is: 152 Beach Road, #21-01/04 Gateway East, Singapore 189721, Singapore

Contents

Part I Introduction and Historical Background 1

2

3

Overall Introduction and Rationale, with View from Computational Biology . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Haruki Nakamura