Molecular Recognition Mechanisms of Calmodulin Examined by Perturbation-Response Scanning
- PDF / 1,000,323 Bytes
- 6 Pages / 432 x 648 pts Page_size
- 101 Downloads / 200 Views
0ROHFXODU5HFRJQLWLRQ0HFKDQLVPVRI&DOPRGXOLQ ([DPLQHGE\3HUWXUEDWLRQ5HVSRQVH6FDQQLQJ $2]OHP$\NXW$OL5DQD$WLOJDQ&DQDQ$WLOJDQ
)DFXOW\RI(QJLQHHULQJDQG1DWXUDO6FLHQFHV6DEDQFL8QLYHUVLW\,VWDQEXO7XUNH\
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
Data Loading...