The Brassica rapa Genome

This book provides insights into the latest achievements in genomics research on Brassica rapa. It describes the findings on this Brassica species, the first of the U’s triangle that has been sequenced and a close relative to the model plant Arabidopsis,

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The Brassica rapa Genome

Compendium of Plant Genomes Series editor Chittaranjan Kole Mohanpur, West Bengal India

More information about this series at http://www.springer.com/series/11805

Xiaowu Wang Chittaranjan Kole •

Editors

The Brassica rapa Genome

123

Editors Xiaowu Wang Institute of Vegetables and Flowers Chinese Academy of Agricultural Sciences Beijing China

ISSN 2199-4781 Compendium of Plant Genomes ISBN 978-3-662-47900-1 DOI 10.1007/978-3-662-47901-8

Chittaranjan Kole Department of Genetics and Plant Breeding Bidhan Chandra Krishi Viswavidyalaya Mohanpur, West Bengal India

ISSN 2199-479X (electronic) ISBN 978-3-662-47901-8

(eBook)

Library of Congress Control Number: 2015946594 Springer Heidelberg New York Dordrecht London © Springer-Verlag Berlin Heidelberg 2015 This work is subject to copyright. All rights are reserved by the Publisher, whether the whole or part of the material is concerned, specifically the rights of translation, reprinting, reuse of illustrations, recitation, broadcasting, reproduction on microfilms or in any other physical way, and transmission or information storage and retrieval, electronic adaptation, computer software, or by similar or dissimilar methodology now known or hereafter developed. The use of general descriptive names, registered names, trademarks, service marks, etc. in this publication does not imply, even in the absence of a specific statement, that such names are exempt from the relevant protective laws and regulations and therefore free for general use. The publisher, the authors and the editors are safe to assume that the advice and information in this book are believed to be true and accurate at the date of publication. Neither the publisher nor the authors or the editors give a warranty, express or implied, with respect to the material contained herein or for any errors or omissions that may have been made. Printed on acid-free paper Springer-Verlag GmbH Berlin Heidelberg is part of Springer Science+Business Media (www.springer.com)

Preface

Brassica rapa is a crop species of the genus Brassia, which belongs to the plant family Brassicaceae (Cruciferae). It has ten chromosomes (2n = 20) and is widely cultivated as oil and vegetables crop across the world. It is also one of the basic species of the other two widely cultivated crops Brassica napus and Brassica juncea. Owning to its close relationship to the model species, Arabidopsis and relatively smaller genome size among the Brassica species, it was identified as the first Brassica species to be sequenced by the BrGSP. The consortium developed a plan based on the experience of Arabidopsis genome sequencing by using BAC to BAC strategy and a complete chromosome A03 was assembled by a Korea team using this traditional sequencing technology. However, the project was finally completed by using the second generation sequencing technology, which adopted completely different assembling strategies from that of traditional Sanger sequencing. The reporting of the whole genome sequence of B. rapa in 2011 was a mi