Research in Computational Molecular Biology 16th Annual Internat
This book constitutes the refereed proceedings of the 16th Annual International Conference on Research in Computational Molecular Biology, RECOMB 2012, held in Barcelona, Spain, in April 2012. The 31 revised full papers presented together with 5 keynote l
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Edited by S. Istrail, P. Pevzner, and M. Waterman Editorial Board: A. Apostolico S. Brunak M. Gelfand T. Lengauer S. Miyano G. Myers M.-F. Sagot D. Sankoff R. Shamir T. Speed M. Vingron W. Wong
Subseries of Lecture Notes in Computer Science
Benny Chor (Ed.)
Research in Computational Molecular Biology 16th Annual International Conference, RECOMB 2012 Barcelona, Spain, April 21-24, 2012 Proceedings
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Series Editors Sorin Istrail, Brown University, Providence, RI, USA Pavel Pevzner, University of California, San Diego, CA, USA Michael Waterman, University of Southern California, Los Angeles, CA, USA Volume Editor Benny Chor Tel-Aviv University School of Computer Science 69978 Tel-Aviv, Israel E-mail: [email protected]
ISSN 0302-9743 e-ISSN 1611-3349 ISBN 978-3-642-29626-0 e-ISBN 978-3-642-29627-7 DOI 10.1007/978-3-642-29627-7 Springer Heidelberg Dordrecht London New York Library of Congress Control Number: 2012935493 CR Subject Classification (1998): F.2.2, H.2.8, I.6, F.2, J.3 LNCS Sublibrary: SL 8 – Bioinformatics
© Springer-Verlag Berlin Heidelberg 2012 This work is subject to copyright. All rights are reserved, whether the whole or part of the material is concerned, specifically the rights of translation, reprinting, re-use of illustrations, recitation, broadcasting, reproduction on microfilms or in any other way, and storage in data banks. Duplication of this publication or parts thereof is permitted only under the provisions of the German Copyright Law of September 9, 1965, in its current version, and permission for use must always be obtained from Springer. Violations are liable to prosecution under the German Copyright Law. The use of general descriptive names, registered names, trademarks, etc. in this publication does not imply, even in the absence of a specific statement, that such names are exempt from the relevant protective laws and regulations and therefore free for general use. Typesetting: Camera-ready by author, data conversion by Scientific Publishing Services, Chennai, India Printed on acid-free paper Springer is part of Springer Science+Business Media (www.springer.com)
Preface
This volume contains the papers presented at RECOMB 2012, the 16th Annual International Conference on Research in Computational Molecular Biology, held in Barcelona during April 21–24, 2012. The RECOMB conference series was started in 1997 by Sorin Istrail, Pavel Pevzner, and Michael Waterman. RECOMB 2012 was hosted by the Centre for Genomic Regulation (CRG), and took place at the Fira Palace hotel, Barcelona. This year, 31 papers were accepted for presentation out of 200 submissions. The papers presented were selected by the Program Committee (PC), with the help of many external reviewers. Each paper was reviewed by at least three members of the PC, or by external reviewers. Following the initial reviews, there was a vivid and extensive e-mail-based discussion over a period of two weeks, leading to the final decisions. Accepted papers were also invited for submission to a special issue of the Journal of Compu
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