Advances in Bioinformatics and Computational Biology 4th Brazili
This book constitutes the refereed proceedings of the 4th Brazilian Symposium on Bioinformatics, BSB 2009, held in Porto Alegre, Brazil, in July 2009 The 12 revised full papers and 6 extended abstracts were carefully reviewed and selected from&n
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Edited by S. Istrail, P. Pevzner, and M. Waterman Editorial Board: A. Apostolico S. Brunak M. Gelfand T. Lengauer S. Miyano G. Myers M.-F. Sagot D. Sankoff R. Shamir T. Speed M. Vingron W. Wong
Subseries of Lecture Notes in Computer Science
Katia S. Guimarães Anna Panchenko Teresa M. Przytycka (Eds.)
Advances in Bioinformatics and Computational Biology 4th Brazilian Symposium on Bioinformatics, BSB 2009 Porto Alegre, Brazil, July 29-31, 2009 Proceedings
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Series Editors Sorin Istrail, Brown University, Providence, RI, USA Pavel Pevzner, University of California, San Diego, CA, USA Michael Waterman, University of Southern California, Los Angeles, CA, USA Volume Editors Katia S. Guimarães Federal University of Pernambuco, Center of Informatics Av. Prof. Luiz Freire, s/n, Cidade Universitária, Recife, PE 50740-540, Brazil E-mail: [email protected] Anna Panchenko Teresa M. Przytycka National Center for Biotechnology Information National Library of Medicine, National Institutes of Health 8600 Rockville Pike, Building 38A, Bethesda, MD 20894, USA E-mail: {panch, przytyck}@ncbi.nlm.nih.gov
Library of Congress Control Number: 2009930955
CR Subject Classification (1998): H.2.8, F.2.1, I.2, G.2.2, J.3, E.1 LNCS Sublibrary: SL 8 – Bioinformatics ISSN ISBN-10 ISBN-13
0302-9743 3-642-03222-2 Springer Berlin Heidelberg New York 978-3-642-03222-6 Springer Berlin Heidelberg New York
This work is subject to copyright. All rights are reserved, whether the whole or part of the material is concerned, specifically the rights of translation, reprinting, re-use of illustrations, recitation, broadcasting, reproduction on microfilms or in any other way, and storage in data banks. Duplication of this publication or parts thereof is permitted only under the provisions of the German Copyright Law of September 9, 1965, in its current version, and permission for use must always be obtained from Springer. Violations are liable to prosecution under the German Copyright Law. springer.com © Springer-Verlag Berlin Heidelberg 2009 Printed in Germany Typesetting: Camera-ready by author, data conversion by Scientific Publishing Services, Chennai, India Printed on acid-free paper SPIN: 12724642 06/3180 543210
Preface
This volume contains the papers selected for presentation at the 4th Brazilian Symposium on Bioinformatics, BSB 2009, which was held in Porto Alegre, Brazil, during August 29–31, 2009. The BSB symposium had its origins in the Brazilian Workshop on Bioinformatics (WOB). WOB had three editions, in 2002 (Gramado, RS), in 2003 (Macaé, RJ), and in 2004 (Brasília, DF). The change in the designation from workshop to symposium reflects the increase in the quality of the contributions and also in the interest of the scientific community for the meeting. The previous editions of BSB took place in São Leopoldo, RS, in 2005, in Angra dos Reis, RJ, in 2007, and in Santo André, SP, in 2008. As evidence of the internationalization of the event, BSB 2009 had 55 submissions from seven countries. Of the 55 papers submitted, 36 were full
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