Algorithms in Bioinformatics 5th International Workshop, WABI 20
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Edited by S. Istrail, P. Pevzner, and M. Waterman Editorial Board: A. Apostolico S. Brunak M. Gelfand T. Lengauer S. Miyano G. Myers M.-F. Sagot D. Sankoff R. Shamir T. Speed M. Vingron W. Wong
Subseries of Lecture Notes in Computer Science
Rita Casadio Gene Myers (Eds.)
Algorithms in Bioinformatics 5th International Workshop, WABI 2005 Mallorca, Spain, October 3-6, 2005 Proceedings
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Series Editors Sorin Istrail, Celera Genomics, Applied Biosystems, Rockville, MD, USA Pavel Pevzner, University of California, San Diego, CA, USA Michael Waterman, University of Southern California, Los Angeles, CA, USA Volume Editors Rita Casadio University of Bologna, Department of Biology/CIRB Via Irnerio 42, 40126 Bologna, Italy E-mail: [email protected] Gene Myers Howard Hughes Medical Institute 4000 Jones Bridge Road, Chavy Chase, MD 20815-6789, USA E-mail: [email protected]
Library of Congress Control Number: 2005932938
CR Subject Classification (1998): F.1, F.2.2, E.1, G.1-3, J.3 ISSN ISBN-10 ISBN-13
0302-9743 3-540-29008-7 Springer Berlin Heidelberg New York 978-3-540-29008-7 Springer Berlin Heidelberg New York
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Preface
We are pleased to present the proceedings of the 5th Workshop on Algorithms in Bioinformatics (WABI 2005) which took place in Mallorca, Spain, October 3–6, 2005. The WABI 2005 workshop was part of the five ALGO 2005 conference meetings, which, in addition to WABI, included ESA, WAOA, IWPEC, and ATMOS. WABI 2005 was sponsored by EATCS (the European Association for Theoretical Computer Science), the ISCB (the International Society for Computational Biology), the Universitat Polit`ecnica de Catalunya, the Universitat de les Illes Balears, and the Ministerio de Educaci´ on y Ciencia. See http://www.lsi.upc.edu/˜wabi05/ for more details. The Workshop on Algorithms in Bioinformatics highlights research work specifically developed to address algorithmic problems in biosequence analysis. The emphasis is therefore on statistical and probabilistic algorithms that address important problems in the field of molecular and structural biology. At present, given the enormous scientific and technical efforts in functional and structural genomic
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